Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Smco2Q9DA21 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Gm12008-201ENSMUST00000117791 755 ntBASIC16.92■□□□□ 0.3
Smco2Q9DA21 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Gm10499-201ENSMUST00000174094 934 ntBASIC16.92■□□□□ 0.3
Smco2Q9DA21 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.92■□□□□ 0.3
Smco2Q9DA21 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Smco2Q9DA21 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Gm27494-201ENSMUST00000184735 189 ntBASIC16.91■□□□□ 0.3
Smco2Q9DA21 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smco2Q9DA21 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smco2Q9DA21 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Mir1895-201ENSMUST00000122615 79 ntBASIC16.9■□□□□ 0.3
Smco2Q9DA21 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Gm45612-201ENSMUST00000211320 160 ntBASIC16.9■□□□□ 0.3
Smco2Q9DA21 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.9■□□□□ 0.3
Smco2Q9DA21 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smco2Q9DA21 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smco2Q9DA21 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
Smco2Q9DA21 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smco2Q9DA21 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
Smco2Q9DA21 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco2Q9DA21 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco2Q9DA21 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Smco2Q9DA21 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.89■□□□□ 0.29
Smco2Q9DA21 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco2Q9DA21 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.89■□□□□ 0.29
Smco2Q9DA21 Gm11025-201ENSMUST00000140773 466 ntBASIC16.89■□□□□ 0.29
Smco2Q9DA21 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smco2Q9DA21 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.89■□□□□ 0.29
Smco2Q9DA21 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.89■□□□□ 0.29
Smco2Q9DA21 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smco2Q9DA21 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smco2Q9DA21 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.89■□□□□ 0.29
Smco2Q9DA21 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco2Q9DA21 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.89■□□□□ 0.29
Smco2Q9DA21 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco2Q9DA21 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Smco2Q9DA21 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smco2Q9DA21 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smco2Q9DA21 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smco2Q9DA21 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.88■□□□□ 0.29
Smco2Q9DA21 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.88■□□□□ 0.29
Smco2Q9DA21 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smco2Q9DA21 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smco2Q9DA21 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smco2Q9DA21 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Smco2Q9DA21 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smco2Q9DA21 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms