Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim42Q9D2H5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.03■□□□□ -0
Trim42Q9D2H5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim42Q9D2H5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.03■□□□□ -0
Trim42Q9D2H5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim42Q9D2H5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim42Q9D2H5 Gm13559-201ENSMUST00000120476 863 ntBASIC15.03■□□□□ -0
Trim42Q9D2H5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.03■□□□□ -0
Trim42Q9D2H5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.03■□□□□ -0
Trim42Q9D2H5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim42Q9D2H5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.03■□□□□ -0
Trim42Q9D2H5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.03■□□□□ -0
Trim42Q9D2H5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Trim42Q9D2H5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trim42Q9D2H5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim42Q9D2H5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim42Q9D2H5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim42Q9D2H5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim42Q9D2H5 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim42Q9D2H5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trim42Q9D2H5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.02■□□□□ -0
Trim42Q9D2H5 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim42Q9D2H5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim42Q9D2H5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.02■□□□□ -0
Trim42Q9D2H5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim42Q9D2H5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim42Q9D2H5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.02■□□□□ -0
Trim42Q9D2H5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim42Q9D2H5 Gm25406-201ENSMUST00000157599 105 ntBASIC15.02■□□□□ -0
Trim42Q9D2H5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim42Q9D2H5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim42Q9D2H5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim42Q9D2H5 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim42Q9D2H5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim42Q9D2H5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim42Q9D2H5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim42Q9D2H5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Trim42Q9D2H5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trim42Q9D2H5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim42Q9D2H5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim42Q9D2H5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim42Q9D2H5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim42Q9D2H5 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.02□□□□□ -0.01
Trim42Q9D2H5 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim42Q9D2H5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim42Q9D2H5 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.01□□□□□ -0.01
Trim42Q9D2H5 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim42Q9D2H5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms