Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Gm6345-202ENSMUST00000180900 204 ntBASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chaf1bQ9D0N7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.13□□□□□ -0.15
Chaf1bQ9D0N7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chaf1bQ9D0N7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms