Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hdhd3Q9CYW4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hdhd3Q9CYW4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm8825-201ENSMUST00000182565 998 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm4518-201ENSMUST00000182638 718 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hdhd3Q9CYW4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hdhd3Q9CYW4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms