Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Smc3Q9CW03 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Gm18669-201ENSMUST00000216049 778 ntBASIC17.67■□□□□ 0.42
Smc3Q9CW03 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Smc3Q9CW03 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smc3Q9CW03 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.66■□□□□ 0.42
Smc3Q9CW03 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Gm12134-201ENSMUST00000122109 520 ntBASIC17.66■□□□□ 0.42
Smc3Q9CW03 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.66■□□□□ 0.42
Smc3Q9CW03 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smc3Q9CW03 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smc3Q9CW03 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Smc3Q9CW03 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smc3Q9CW03 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smc3Q9CW03 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.64■□□□□ 0.42
Smc3Q9CW03 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smc3Q9CW03 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.64■□□□□ 0.41
Smc3Q9CW03 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Smc3Q9CW03 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Gm4535-201ENSMUST00000182274 558 ntBASIC17.64■□□□□ 0.41
Smc3Q9CW03 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.64■□□□□ 0.41
Smc3Q9CW03 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Gm10355-201ENSMUST00000097146 517 ntBASIC17.64■□□□□ 0.41
Smc3Q9CW03 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smc3Q9CW03 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Smc3Q9CW03 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smc3Q9CW03 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms