Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smc1aQ9CU62 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.8■□□□□ 0.28
Smc1aQ9CU62 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smc1aQ9CU62 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Mir6404-201ENSMUST00000183699 94 ntBASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Smc1aQ9CU62 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smc1aQ9CU62 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Smc1aQ9CU62 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms