Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nipsnap3bQ9CQE1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm27646-201ENSMUST00000183989 110 ntBASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nipsnap3bQ9CQE1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Celf4-206ENSMUST00000224553 1729 ntBASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nipsnap3bQ9CQE1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nipsnap3bQ9CQE1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms