Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Rprl3-201ENSMUST00000157400 290 ntBASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim8Q99PJ2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Gm15165-201ENSMUST00000118140 502 ntBASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Gm4459-201ENSMUST00000118750 468 ntBASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Gm9103-201ENSMUST00000119371 405 ntBASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim8Q99PJ2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim8Q99PJ2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim8Q99PJ2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms