Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tlr3Q99MB1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Gm27300-201ENSMUST00000184085 97 ntBASIC16.11■□□□□ 0.17
Tlr3Q99MB1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Gm27335-201ENSMUST00000184758 97 ntBASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Tlr3Q99MB1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.1■□□□□ 0.17
Tlr3Q99MB1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.09■□□□□ 0.17
Tlr3Q99MB1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.09■□□□□ 0.17
Tlr3Q99MB1 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.09■□□□□ 0.17
Tlr3Q99MB1 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms