Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Thumpd1Q99J36 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Gm15565-201ENSMUST00000118890 427 ntBASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thumpd1Q99J36 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Gm25016-201ENSMUST00000158399 131 ntBASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Thumpd1Q99J36 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd1Q99J36 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd1Q99J36 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms