Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha8Q91Y12 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 AV026068-213ENSMUST00000223675 1171 ntBASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha8Q91Y12 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Efs-202ENSMUST00000227037 2540 ntBASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Gm7787-201ENSMUST00000216858 688 ntBASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha8Q91Y12 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdha8Q91Y12 Gm10499-201ENSMUST00000174094 934 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms