Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Gm9727-201ENSMUST00000161387 555 ntBASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.81□□□□□ -0.04
Pcdhga4Q91XY4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Gm15467-201ENSMUST00000120582 445 ntBASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhga4Q91XY4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhga4Q91XY4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms