Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Mir770-201ENSMUST00000103252 94 ntBASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Gm10231-201ENSMUST00000181584 441 ntBASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Gm10175-202ENSMUST00000208752 441 ntBASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rab40cQ8VHQ4 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rab40cQ8VHQ4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rab40cQ8VHQ4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rab40cQ8VHQ4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rab40cQ8VHQ4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Rab40cQ8VHQ4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rab40cQ8VHQ4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rab40cQ8VHQ4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.27□□□□□ -0.44
Rab40cQ8VHQ4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Gm9172-201ENSMUST00000212092 954 ntBASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.27□□□□□ -0.45
Rab40cQ8VHQ4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Gm10013-201ENSMUST00000106074 672 ntBASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Gm18032-201ENSMUST00000222541 538 ntBASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rab40cQ8VHQ4 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms