Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup35Q8R4R6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Rprl3-201ENSMUST00000157400 290 ntBASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.26□□□□□ -0.45
Nup35Q8R4R6 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Gm18622-201ENSMUST00000219361 595 ntBASIC12.26□□□□□ -0.45
Nup35Q8R4R6 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup35Q8R4R6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Gm15565-201ENSMUST00000118890 427 ntBASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Gm44454-201ENSMUST00000198541 138 ntBASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup35Q8R4R6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nup35Q8R4R6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms