Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Gm25016-201ENSMUST00000158399 131 ntBASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Gm6659-201ENSMUST00000174752 547 ntBASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slf1Q8R3P9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slf1Q8R3P9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slf1Q8R3P9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slf1Q8R3P9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Slf1Q8R3P9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slf1Q8R3P9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Gm11950-201ENSMUST00000121615 838 ntBASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Slf1Q8R3P9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slf1Q8R3P9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slf1Q8R3P9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slf1Q8R3P9 AA414768-201ENSMUST00000121924 1257 ntBASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Gm29518-201ENSMUST00000190858 372 ntBASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Slf1Q8R3P9 Gm17808-201ENSMUST00000200859 894 ntBASIC15.18■□□□□ 0.02
Slf1Q8R3P9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms