Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Gm11764-201ENSMUST00000120221 623 ntBASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cchcr1Q8K2I2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cchcr1Q8K2I2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cchcr1Q8K2I2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cchcr1Q8K2I2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cchcr1Q8K2I2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cchcr1Q8K2I2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cchcr1Q8K2I2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Gm5682-201ENSMUST00000173402 505 ntBASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Gm6376-201ENSMUST00000209407 580 ntBASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Gm7787-201ENSMUST00000216858 688 ntBASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cchcr1Q8K2I2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.74■□□□□ 0.43
Cchcr1Q8K2I2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Gm12134-201ENSMUST00000122109 520 ntBASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Gm7230-201ENSMUST00000173026 815 ntBASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cchcr1Q8K2I2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms