Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmgcs1Q8JZK9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Gm34391-201ENSMUST00000203706 907 ntBASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hmgcs1Q8JZK9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgcs1Q8JZK9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgcs1Q8JZK9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgcs1Q8JZK9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgcs1Q8JZK9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgcs1Q8JZK9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgcs1Q8JZK9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgcs1Q8JZK9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgcs1Q8JZK9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Gm43347-201ENSMUST00000200226 580 ntBASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgcs1Q8JZK9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms