Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nup88Q8CEC0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Gm24513-201ENSMUST00000174964 138 ntBASIC17.72■□□□□ 0.43
Nup88Q8CEC0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Nup88Q8CEC0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Mir8117-201ENSMUST00000184773 107 ntBASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Gm27397-201ENSMUST00000184997 107 ntBASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nup88Q8CEC0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nup88Q8CEC0 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.71■□□□□ 0.42
Nup88Q8CEC0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Nup88Q8CEC0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nup88Q8CEC0 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nup88Q8CEC0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nup88Q8CEC0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms