Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vcpip1Q8CDG3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vcpip1Q8CDG3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vcpip1Q8CDG3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vcpip1Q8CDG3 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.14■□□□□ 0.18
Vcpip1Q8CDG3 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Vcpip1Q8CDG3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vcpip1Q8CDG3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Celf4-206ENSMUST00000224553 1729 ntBASIC16.14■□□□□ 0.17
Vcpip1Q8CDG3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vcpip1Q8CDG3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm44357-201ENSMUST00000195897 142 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm19658-201ENSMUST00000196231 138 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm44367-201ENSMUST00000196836 138 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm44350-201ENSMUST00000197197 138 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm44390-201ENSMUST00000197533 144 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm44313-201ENSMUST00000198018 138 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm44486-201ENSMUST00000198508 138 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm44314-201ENSMUST00000199263 138 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm44394-201ENSMUST00000199558 138 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm44484-201ENSMUST00000199873 138 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm44466-201ENSMUST00000200264 138 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 Gm44359-201ENSMUST00000200671 138 ntBASIC16.12■□□□□ 0.17
Vcpip1Q8CDG3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms