Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pabpn1Q8CCS6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Pabpn1Q8CCS6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pabpn1Q8CCS6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC22.88■■□□□ 1.25
Pabpn1Q8CCS6 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pabpn1Q8CCS6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pabpn1Q8CCS6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC22.87■■□□□ 1.25
Pabpn1Q8CCS6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pabpn1Q8CCS6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pabpn1Q8CCS6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pabpn1Q8CCS6 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pabpn1Q8CCS6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC22.87■■□□□ 1.25
Pabpn1Q8CCS6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pabpn1Q8CCS6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pabpn1Q8CCS6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC22.87■■□□□ 1.25
Pabpn1Q8CCS6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pabpn1Q8CCS6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC22.87■■□□□ 1.25
Pabpn1Q8CCS6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Pabpn1Q8CCS6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pabpn1Q8CCS6 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pabpn1Q8CCS6 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC22.86■■□□□ 1.25
Pabpn1Q8CCS6 AC140406.1-201ENSMUST00000226481 465 ntBASIC22.86■■□□□ 1.25
Pabpn1Q8CCS6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pabpn1Q8CCS6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pabpn1Q8CCS6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pabpn1Q8CCS6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pabpn1Q8CCS6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pabpn1Q8CCS6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Dmtn-207ENSMUST00000228001 2437 ntBASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pabpn1Q8CCS6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pabpn1Q8CCS6 Gm9333-201ENSMUST00000205452 1323 ntBASIC22.84■■□□□ 1.25
Pabpn1Q8CCS6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pabpn1Q8CCS6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Pabpn1Q8CCS6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pabpn1Q8CCS6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pabpn1Q8CCS6 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC22.84■■□□□ 1.25
Pabpn1Q8CCS6 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Pabpn1Q8CCS6 Gm27320-201ENSMUST00000184892 109 ntBASIC22.84■■□□□ 1.25
Pabpn1Q8CCS6 Mir7032-201ENSMUST00000185154 79 ntBASIC22.84■■□□□ 1.25
Pabpn1Q8CCS6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC22.84■■□□□ 1.25
Pabpn1Q8CCS6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC22.84■■□□□ 1.25
Pabpn1Q8CCS6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pabpn1Q8CCS6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Gm44207-201ENSMUST00000204568 1424 ntBASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Gm13464-201ENSMUST00000119418 935 ntBASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Gm7895-201ENSMUST00000187459 1173 ntBASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Gm21470-201ENSMUST00000187680 696 ntBASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Gm19078-201ENSMUST00000206311 727 ntBASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pabpn1Q8CCS6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pabpn1Q8CCS6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Gm6283-201ENSMUST00000182369 1000 ntBASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Gm6334-201ENSMUST00000207083 228 ntBASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pabpn1Q8CCS6 Gm5953-201ENSMUST00000220644 2616 ntBASIC22.82■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms