Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.54■□□□□ 0.4
Usp44Q8C2S0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Gm4995-201ENSMUST00000117247 432 ntBASIC17.54■□□□□ 0.4
Usp44Q8C2S0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp44Q8C2S0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Gm15427-201ENSMUST00000117288 531 ntBASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Gm8749-201ENSMUST00000117737 331 ntBASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp44Q8C2S0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Gm8000-201ENSMUST00000188378 592 ntBASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp44Q8C2S0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Usp44Q8C2S0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.52■□□□□ 0.39
Usp44Q8C2S0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.52■□□□□ 0.39
Usp44Q8C2S0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Usp44Q8C2S0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Usp44Q8C2S0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp44Q8C2S0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp44Q8C2S0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Usp44Q8C2S0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp44Q8C2S0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp44Q8C2S0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms