Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm3961-201ENSMUST00000204425 994 ntBASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Gm37986-201ENSMUST00000193285 383 ntBASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Chd9Q8BYH8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd9Q8BYH8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.71□□□□□ -0.54
Chd9Q8BYH8 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Gm27701-201ENSMUST00000184498 110 ntBASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Gm7399-201ENSMUST00000032395 858 ntBASIC11.71□□□□□ -0.54
Chd9Q8BYH8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Chd9Q8BYH8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chd9Q8BYH8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.69□□□□□ -0.54
Chd9Q8BYH8 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms