Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Gm19164-201ENSMUST00000210667 640 ntBASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cpsf4Q8BQZ5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Gm13036-201ENSMUST00000117799 748 ntBASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Gm27628-201ENSMUST00000184911 107 ntBASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpsf4Q8BQZ5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Gm7222-201ENSMUST00000117512 906 ntBASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Gm43514-201ENSMUST00000198852 424 ntBASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Gm18206-201ENSMUST00000207027 926 ntBASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.56□□□□□ -0.08
Cpsf4Q8BQZ5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Gm15358-201ENSMUST00000119249 520 ntBASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpsf4Q8BQZ5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms