Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chmp2bQ8BJF9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Gm33142-201ENSMUST00000193913 867 ntBASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chmp2bQ8BJF9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Gm15372-201ENSMUST00000120729 834 ntBASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Gm8318-201ENSMUST00000182954 872 ntBASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Gm27357-201ENSMUST00000183754 135 ntBASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp2bQ8BJF9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Chmp2bQ8BJF9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Chmp2bQ8BJF9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Gm12895-201ENSMUST00000122214 226 ntBASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp2bQ8BJF9 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp2bQ8BJF9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms