Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc40Q8BI79 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gm44357-201ENSMUST00000195897 142 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gm19658-201ENSMUST00000196231 138 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gm44367-201ENSMUST00000196836 138 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gm44350-201ENSMUST00000197197 138 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gm44390-201ENSMUST00000197533 144 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gm44313-201ENSMUST00000198018 138 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gm44486-201ENSMUST00000198508 138 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gm44314-201ENSMUST00000199263 138 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gm44394-201ENSMUST00000199558 138 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gm44484-201ENSMUST00000199873 138 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gm44466-201ENSMUST00000200264 138 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gm44359-201ENSMUST00000200671 138 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gm6296-201ENSMUST00000222599 943 ntBASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc40Q8BI79 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Gm24589-201ENSMUST00000116692 94 ntBASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Gm27646-201ENSMUST00000183989 110 ntBASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc40Q8BI79 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc40Q8BI79 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms