Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rpp38Q80UU2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rpp38Q80UU2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Gm16026-204ENSMUST00000162652 683 ntBASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Gm17968-201ENSMUST00000194902 784 ntBASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rpp38Q80UU2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.96□□□□□ -0.01
Rpp38Q80UU2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Gm44771-201ENSMUST00000206975 626 ntBASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Gm18206-201ENSMUST00000207027 926 ntBASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Gm45747-201ENSMUST00000212203 999 ntBASIC14.96□□□□□ -0.01
Rpp38Q80UU2 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Gm10154-201ENSMUST00000084445 354 ntBASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rpp38Q80UU2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpp38Q80UU2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpp38Q80UU2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Rpp38Q80UU2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rpp38Q80UU2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rpp38Q80UU2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms