Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Pcdh8Q7TSK3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Gm15920-201ENSMUST00000118998 402 ntBASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Gm13365-201ENSMUST00000121188 973 ntBASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 BC037039-201ENSMUST00000192003 2205 ntBASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh8Q7TSK3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Gm11745-201ENSMUST00000121669 448 ntBASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Gm44335-201ENSMUST00000196879 141 ntBASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Gm44297-201ENSMUST00000198304 141 ntBASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Gm44346-201ENSMUST00000198851 141 ntBASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdh8Q7TSK3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Gm9385-201ENSMUST00000117563 472 ntBASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdh8Q7TSK3 Rprl2-201ENSMUST00000157150 290 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms