Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ddx58Q6Q899 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ddx58Q6Q899 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Gm15693-201ENSMUST00000120470 637 ntBASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx58Q6Q899 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Ddx58Q6Q899 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx58Q6Q899 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx58Q6Q899 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx58Q6Q899 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx58Q6Q899 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.52■□□□□ 0.55
Ddx58Q6Q899 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx58Q6Q899 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx58Q6Q899 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx58Q6Q899 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx58Q6Q899 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.51■□□□□ 0.55
Ddx58Q6Q899 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx58Q6Q899 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx58Q6Q899 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms