Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nup98Q6PFD9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup98Q6PFD9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.47■□□□□ 0.39
Nup98Q6PFD9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup98Q6PFD9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nup98Q6PFD9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nup98Q6PFD9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nup98Q6PFD9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.45■□□□□ 0.38
Nup98Q6PFD9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup98Q6PFD9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nup98Q6PFD9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms