Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Gm6745-201ENSMUST00000199216 526 ntBASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Snrnp40Q6PE01 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Snrnp40Q6PE01 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Snrnp40Q6PE01 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Snrnp40Q6PE01 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Gm23984-201ENSMUST00000157139 203 ntBASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Snrnp40Q6PE01 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Gm5479-201ENSMUST00000160578 435 ntBASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Snrnp40Q6PE01 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Snrnp40Q6PE01 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms