Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Carlr-201ENSMUST00000181515 2574 ntBASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Gm11764-201ENSMUST00000120221 623 ntBASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sp140Q6NSQ5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sp140Q6NSQ5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Gm43767-201ENSMUST00000198933 381 ntBASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Gm7787-201ENSMUST00000216858 688 ntBASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 AV026068-213ENSMUST00000223675 1171 ntBASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sp140Q6NSQ5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sp140Q6NSQ5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms