Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.09□□□□□ -0.63
Foxc1Q61572 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.09□□□□□ -0.63
Foxc1Q61572 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Foxc1Q61572 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Foxc1Q61572 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Foxc1Q61572 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.09□□□□□ -0.63
Foxc1Q61572 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Foxc1Q61572 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Foxc1Q61572 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Foxc1Q61572 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm15074-201ENSMUST00000117603 936 ntBASIC11.08□□□□□ -0.64
Foxc1Q61572 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.08□□□□□ -0.64
Foxc1Q61572 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm22119-201ENSMUST00000175594 99 ntBASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm27646-201ENSMUST00000183989 110 ntBASIC11.08□□□□□ -0.64
Foxc1Q61572 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm21147-201ENSMUST00000186046 913 ntBASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm6550-201ENSMUST00000187574 993 ntBASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm28923-201ENSMUST00000187755 322 ntBASIC11.08□□□□□ -0.64
Foxc1Q61572 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
Foxc1Q61572 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.08□□□□□ -0.64
Foxc1Q61572 AV026068-213ENSMUST00000223675 1171 ntBASIC11.08□□□□□ -0.64
Foxc1Q61572 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm15590-201ENSMUST00000078419 552 ntBASIC11.08□□□□□ -0.64
Foxc1Q61572 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm18719-201ENSMUST00000196696 1413 ntBASIC11.08□□□□□ -0.64
Foxc1Q61572 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Foxc1Q61572 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.08□□□□□ -0.64
Foxc1Q61572 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Foxc1Q61572 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Foxc1Q61572 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.07□□□□□ -0.64
Foxc1Q61572 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Gm5264-201ENSMUST00000190584 848 ntBASIC11.07□□□□□ -0.64
Foxc1Q61572 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Foxc1Q61572 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms