Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mre11Q61216 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mre11Q61216 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mre11Q61216 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mre11Q61216 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mre11Q61216 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.99■□□□□ 0.47
Mre11Q61216 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.99■□□□□ 0.47
Mre11Q61216 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.99■□□□□ 0.47
Mre11Q61216 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.99■□□□□ 0.47
Mre11Q61216 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.99■□□□□ 0.47
Mre11Q61216 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Mre11Q61216 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.99■□□□□ 0.47
Mre11Q61216 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mre11Q61216 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mre11Q61216 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Mre11Q61216 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mre11Q61216 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mre11Q61216 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mre11Q61216 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mre11Q61216 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Mre11Q61216 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mre11Q61216 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Mre11Q61216 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mre11Q61216 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Mre11Q61216 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Mre11Q61216 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.98■□□□□ 0.47
Mre11Q61216 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Mre11Q61216 Mir6982-201ENSMUST00000184354 68 ntBASIC17.98■□□□□ 0.47
Mre11Q61216 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.98■□□□□ 0.47
Mre11Q61216 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.98■□□□□ 0.47
Mre11Q61216 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mre11Q61216 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mre11Q61216 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Mre11Q61216 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.97■□□□□ 0.47
Mre11Q61216 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mre11Q61216 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Mre11Q61216 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mre11Q61216 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Mre11Q61216 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mre11Q61216 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Mre11Q61216 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.97■□□□□ 0.47
Mre11Q61216 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Mre11Q61216 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mre11Q61216 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mre11Q61216 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.97■□□□□ 0.47
Mre11Q61216 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mre11Q61216 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mre11Q61216 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.97■□□□□ 0.47
Mre11Q61216 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mre11Q61216 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Mre11Q61216 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Mre11Q61216 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mre11Q61216 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC17.97■□□□□ 0.47
Mre11Q61216 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.96■□□□□ 0.47
Mre11Q61216 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Mre11Q61216 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Mre11Q61216 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.96■□□□□ 0.47
Mre11Q61216 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Mir1668-201ENSMUST00000184114 107 ntBASIC17.96■□□□□ 0.47
Mre11Q61216 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.96■□□□□ 0.47
Mre11Q61216 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mre11Q61216 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.46
Mre11Q61216 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mre11Q61216 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms