Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Mir1894-201ENSMUST00000122802 81 ntBASIC12.49□□□□□ -0.41
Hcfc1Q61191 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Gm44719-201ENSMUST00000206404 149 ntBASIC12.49□□□□□ -0.41
Hcfc1Q61191 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Gm6007-201ENSMUST00000208170 823 ntBASIC12.49□□□□□ -0.41
Hcfc1Q61191 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Hcfc1Q61191 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Gm28760-201ENSMUST00000185995 736 ntBASIC12.48□□□□□ -0.41
Hcfc1Q61191 Gm33320-201ENSMUST00000192232 530 ntBASIC12.48□□□□□ -0.41
Hcfc1Q61191 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.48□□□□□ -0.41
Hcfc1Q61191 Gm18062-201ENSMUST00000208020 547 ntBASIC12.48□□□□□ -0.41
Hcfc1Q61191 Gm18055-201ENSMUST00000208254 547 ntBASIC12.48□□□□□ -0.41
Hcfc1Q61191 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hcfc1Q61191 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.47□□□□□ -0.41
Hcfc1Q61191 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.47□□□□□ -0.41
Hcfc1Q61191 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.47□□□□□ -0.41
Hcfc1Q61191 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.47□□□□□ -0.41
Hcfc1Q61191 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.47□□□□□ -0.41
Hcfc1Q61191 Gm46209-201ENSMUST00000217912 553 ntBASIC12.47□□□□□ -0.41
Hcfc1Q61191 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hcfc1Q61191 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Mir6392-201ENSMUST00000184924 108 ntBASIC12.46□□□□□ -0.41
Hcfc1Q61191 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hcfc1Q61191 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms