Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Scarb1Q61009 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.68□□□□□ -0.38
Scarb1Q61009 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.68□□□□□ -0.38
Scarb1Q61009 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.68□□□□□ -0.38
Scarb1Q61009 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scarb1Q61009 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Scarb1Q61009 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Scarb1Q61009 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Scarb1Q61009 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Scarb1Q61009 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Scarb1Q61009 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Scarb1Q61009 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scarb1Q61009 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.67□□□□□ -0.38
Scarb1Q61009 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.67□□□□□ -0.38
Scarb1Q61009 Gm25406-201ENSMUST00000157599 105 ntBASIC12.67□□□□□ -0.38
Scarb1Q61009 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.67□□□□□ -0.38
Scarb1Q61009 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.67□□□□□ -0.38
Scarb1Q61009 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.67□□□□□ -0.38
Scarb1Q61009 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Scarb1Q61009 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Scarb1Q61009 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Scarb1Q61009 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Scarb1Q61009 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scarb1Q61009 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Scarb1Q61009 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.66□□□□□ -0.38
Scarb1Q61009 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Gm6623-201ENSMUST00000173570 544 ntBASIC12.66□□□□□ -0.38
Scarb1Q61009 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.66□□□□□ -0.38
Scarb1Q61009 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.66□□□□□ -0.38
Scarb1Q61009 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scarb1Q61009 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scarb1Q61009 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scarb1Q61009 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scarb1Q61009 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scarb1Q61009 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Scarb1Q61009 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scarb1Q61009 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scarb1Q61009 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scarb1Q61009 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms