Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Gm11814-201ENSMUST00000119515 929 ntBASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Gm10275-202ENSMUST00000168697 495 ntBASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Gm10275-201ENSMUST00000092620 635 ntBASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col27a1Q5QNQ9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Gm6091-201ENSMUST00000098307 165 ntBASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col27a1Q5QNQ9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Gm15236-201ENSMUST00000117309 379 ntBASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Gm7287-201ENSMUST00000205267 602 ntBASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col27a1Q5QNQ9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Col27a1Q5QNQ9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col27a1Q5QNQ9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col27a1Q5QNQ9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col27a1Q5QNQ9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Col27a1Q5QNQ9 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.21□□□□□ -0.14
Col27a1Q5QNQ9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Gm15429-201ENSMUST00000151268 798 ntBASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Gm29127-201ENSMUST00000188304 517 ntBASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.2□□□□□ -0.14
Col27a1Q5QNQ9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms