Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ccdc190Q3URK1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc190Q3URK1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Gm15794-201ENSMUST00000120182 631 ntBASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Mir6404-201ENSMUST00000183699 94 ntBASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc190Q3URK1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc190Q3URK1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms