Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox4Q06831 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox4Q06831 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sox4Q06831 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Sox4Q06831 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox4Q06831 Gm14822-201ENSMUST00000122247 291 ntBASIC14.75□□□□□ -0.05
Sox4Q06831 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.75□□□□□ -0.05
Sox4Q06831 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox4Q06831 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Sox4Q06831 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.75□□□□□ -0.05
Sox4Q06831 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox4Q06831 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.74□□□□□ -0.05
Sox4Q06831 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.74□□□□□ -0.05
Sox4Q06831 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.74□□□□□ -0.05
Sox4Q06831 Gm15427-201ENSMUST00000117288 531 ntBASIC14.74□□□□□ -0.05
Sox4Q06831 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.74□□□□□ -0.05
Sox4Q06831 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.74□□□□□ -0.05
Sox4Q06831 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.74□□□□□ -0.05
Sox4Q06831 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sox4Q06831 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Sox4Q06831 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox4Q06831 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sox4Q06831 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sox4Q06831 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox4Q06831 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.73□□□□□ -0.05
Sox4Q06831 Gm24513-201ENSMUST00000174964 138 ntBASIC14.73□□□□□ -0.05
Sox4Q06831 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Gm27397-201ENSMUST00000184997 107 ntBASIC14.73□□□□□ -0.05
Sox4Q06831 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.73□□□□□ -0.05
Sox4Q06831 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.73□□□□□ -0.05
Sox4Q06831 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sox4Q06831 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sox4Q06831 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.73□□□□□ -0.05
Sox4Q06831 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox4Q06831 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.73□□□□□ -0.05
Sox4Q06831 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox4Q06831 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sox4Q06831 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox4Q06831 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sox4Q06831 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sox4Q06831 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox4Q06831 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms