Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1sQ02789 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1sQ02789 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC18.67■□□□□ 0.58
Cacna1sQ02789 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC18.67■□□□□ 0.58
Cacna1sQ02789 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Gm24644-201ENSMUST00000157114 139 ntBASIC18.67■□□□□ 0.58
Cacna1sQ02789 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC18.67■□□□□ 0.58
Cacna1sQ02789 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Mir3102-201ENSMUST00000175555 104 ntBASIC18.67■□□□□ 0.58
Cacna1sQ02789 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.67■□□□□ 0.58
Cacna1sQ02789 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1sQ02789 AC126253.1-201ENSMUST00000227974 824 ntBASIC18.67■□□□□ 0.58
Cacna1sQ02789 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1sQ02789 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cacna1sQ02789 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Gm5940-201ENSMUST00000117582 1068 ntBASIC18.66■□□□□ 0.58
Cacna1sQ02789 Gm43118-201ENSMUST00000199149 775 ntBASIC18.66■□□□□ 0.58
Cacna1sQ02789 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Gm7287-201ENSMUST00000205267 602 ntBASIC18.66■□□□□ 0.58
Cacna1sQ02789 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Gm7399-201ENSMUST00000032395 858 ntBASIC18.66■□□□□ 0.58
Cacna1sQ02789 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Gm6091-201ENSMUST00000098307 165 ntBASIC18.66■□□□□ 0.58
Cacna1sQ02789 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1sQ02789 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1sQ02789 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cacna1sQ02789 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1sQ02789 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.65■□□□□ 0.58
Cacna1sQ02789 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.65■□□□□ 0.58
Cacna1sQ02789 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1sQ02789 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cacna1sQ02789 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.65■□□□□ 0.58
Cacna1sQ02789 Gm29127-201ENSMUST00000188304 517 ntBASIC18.65■□□□□ 0.58
Cacna1sQ02789 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1sQ02789 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cacna1sQ02789 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1sQ02789 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1sQ02789 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.65■□□□□ 0.58
Cacna1sQ02789 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cacna1sQ02789 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1sQ02789 Gm15429-201ENSMUST00000151268 798 ntBASIC18.65■□□□□ 0.58
Cacna1sQ02789 Gm38241-201ENSMUST00000192641 898 ntBASIC18.65■□□□□ 0.58
Cacna1sQ02789 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1sQ02789 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cacna1sQ02789 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cacna1sQ02789 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.64■□□□□ 0.58
Cacna1sQ02789 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
Cacna1sQ02789 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC18.64■□□□□ 0.57
Cacna1sQ02789 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1sQ02789 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1sQ02789 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms