Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Thumpd3P97770 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd3P97770 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Thumpd3P97770 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.29■□□□□ 0.04
Thumpd3P97770 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Thumpd3P97770 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Thumpd3P97770 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd3P97770 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Thumpd3P97770 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd3P97770 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd3P97770 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd3P97770 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd3P97770 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd3P97770 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thumpd3P97770 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Thumpd3P97770 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Thumpd3P97770 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Thumpd3P97770 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Thumpd3P97770 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Thumpd3P97770 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.28■□□□□ 0.04
Thumpd3P97770 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm8825-201ENSMUST00000182565 998 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm4518-201ENSMUST00000182638 718 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.28■□□□□ 0.04
Thumpd3P97770 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Thumpd3P97770 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thumpd3P97770 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.27■□□□□ 0.04
Thumpd3P97770 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Thumpd3P97770 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd3P97770 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Thumpd3P97770 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd3P97770 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Thumpd3P97770 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd3P97770 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd3P97770 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Thumpd3P97770 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.27■□□□□ 0.04
Thumpd3P97770 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd3P97770 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd3P97770 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd3P97770 Gm18206-201ENSMUST00000207027 926 ntBASIC15.27■□□□□ 0.04
Thumpd3P97770 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd3P97770 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.27■□□□□ 0.04
Thumpd3P97770 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd3P97770 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd3P97770 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thumpd3P97770 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd3P97770 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd3P97770 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd3P97770 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Thumpd3P97770 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.27■□□□□ 0.03
Thumpd3P97770 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Thumpd3P97770 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Thumpd3P97770 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Thumpd3P97770 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Thumpd3P97770 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.26■□□□□ 0.03
Thumpd3P97770 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Thumpd3P97770 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Mir5131-201ENSMUST00000175426 93 ntBASIC15.26■□□□□ 0.03
Thumpd3P97770 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thumpd3P97770 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Thumpd3P97770 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms