Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.2□□□□□ -0.14
Nkx3-2P97503 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx3-2P97503 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.19□□□□□ -0.14
Nkx3-2P97503 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Gm2272-201ENSMUST00000194903 582 ntBASIC14.19□□□□□ -0.14
Nkx3-2P97503 Gm44492-201ENSMUST00000197012 141 ntBASIC14.19□□□□□ -0.14
Nkx3-2P97503 Gm18246-201ENSMUST00000221023 728 ntBASIC14.19□□□□□ -0.14
Nkx3-2P97503 Chchd1-203ENSMUST00000224633 557 ntBASIC14.19□□□□□ -0.14
Nkx3-2P97503 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx3-2P97503 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.18□□□□□ -0.14
Nkx3-2P97503 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.18□□□□□ -0.14
Nkx3-2P97503 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.18□□□□□ -0.14
Nkx3-2P97503 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Gm15427-201ENSMUST00000117288 531 ntBASIC14.18□□□□□ -0.14
Nkx3-2P97503 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.18□□□□□ -0.14
Nkx3-2P97503 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Gm26308-201ENSMUST00000157768 69 ntBASIC14.18□□□□□ -0.14
Nkx3-2P97503 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Gm45747-201ENSMUST00000212203 999 ntBASIC14.18□□□□□ -0.14
Nkx3-2P97503 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx3-2P97503 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx3-2P97503 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.17□□□□□ -0.14
Nkx3-2P97503 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx3-2P97503 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx3-2P97503 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx3-2P97503 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nkx3-2P97503 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx3-2P97503 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.17□□□□□ -0.14
Nkx3-2P97503 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkx3-2P97503 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms