Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm5479-201ENSMUST00000160578 435 ntBASIC18.69■□□□□ 0.58
Smarcc1P97496 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.69■□□□□ 0.58
Smarcc1P97496 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcc1P97496 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarcc1P97496 Gm46209-201ENSMUST00000217912 553 ntBASIC18.69■□□□□ 0.58
Smarcc1P97496 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Smarcc1P97496 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Smarcc1P97496 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smarcc1P97496 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smarcc1P97496 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarcc1P97496 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smarcc1P97496 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc1P97496 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc1P97496 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc1P97496 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smarcc1P97496 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc1P97496 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc1P97496 Gm20445-201ENSMUST00000061905 565 ntBASIC18.68■□□□□ 0.58
Smarcc1P97496 Gm25857-201ENSMUST00000082788 129 ntBASIC18.68■□□□□ 0.58
Smarcc1P97496 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Smarcc1P97496 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc1P97496 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc1P97496 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc1P97496 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Smarcc1P97496 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc1P97496 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc1P97496 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.68■□□□□ 0.58
Smarcc1P97496 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc1P97496 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc1P97496 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc1P97496 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Smarcc1P97496 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc1P97496 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc1P97496 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc1P97496 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc1P97496 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc1P97496 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.67■□□□□ 0.58
Smarcc1P97496 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc1P97496 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc1P97496 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.67■□□□□ 0.58
Smarcc1P97496 Gm43703-201ENSMUST00000200523 763 ntBASIC18.67■□□□□ 0.58
Smarcc1P97496 Gm45384-201ENSMUST00000210451 277 ntBASIC18.67■□□□□ 0.58
Smarcc1P97496 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.67■□□□□ 0.58
Smarcc1P97496 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc1P97496 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Smarcc1P97496 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc1P97496 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc1P97496 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc1P97496 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc1P97496 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc1P97496 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smarcc1P97496 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc1P97496 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc1P97496 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc1P97496 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc1P97496 Gm11478-201ENSMUST00000117851 599 ntBASIC18.66■□□□□ 0.58
Smarcc1P97496 Gm12138-201ENSMUST00000122180 951 ntBASIC18.66■□□□□ 0.58
Smarcc1P97496 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.66■□□□□ 0.58
Smarcc1P97496 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.66■□□□□ 0.58
Smarcc1P97496 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc1P97496 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.66■□□□□ 0.58
Smarcc1P97496 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.66■□□□□ 0.58
Smarcc1P97496 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc1P97496 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smarcc1P97496 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.66■□□□□ 0.58
Smarcc1P97496 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc1P97496 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc1P97496 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc1P97496 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc1P97496 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
Smarcc1P97496 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.66■□□□□ 0.58
Smarcc1P97496 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.66■□□□□ 0.58
Smarcc1P97496 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc1P97496 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.65■□□□□ 0.58
Smarcc1P97496 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarcc1P97496 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarcc1P97496 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarcc1P97496 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Smarcc1P97496 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc1P97496 Gm14042-201ENSMUST00000120139 833 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms