Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pfn1P62962 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.67□□□□□ -0.54
Pfn1P62962 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pfn1P62962 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.67□□□□□ -0.54
Pfn1P62962 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pfn1P62962 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pfn1P62962 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.67□□□□□ -0.54
Pfn1P62962 Gm13436-201ENSMUST00000120418 567 ntBASIC11.67□□□□□ -0.54
Pfn1P62962 Mir5130-201ENSMUST00000175160 84 ntBASIC11.67□□□□□ -0.54
Pfn1P62962 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.67□□□□□ -0.54
Pfn1P62962 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.67□□□□□ -0.54
Pfn1P62962 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.67□□□□□ -0.54
Pfn1P62962 Gm7367-201ENSMUST00000057611 492 ntBASIC11.67□□□□□ -0.54
Pfn1P62962 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pfn1P62962 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pfn1P62962 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pfn1P62962 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pfn1P62962 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Pfn1P62962 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
Pfn1P62962 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pfn1P62962 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pfn1P62962 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Pfn1P62962 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pfn1P62962 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.66□□□□□ -0.54
Pfn1P62962 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pfn1P62962 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Pfn1P62962 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.66□□□□□ -0.54
Pfn1P62962 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pfn1P62962 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.66□□□□□ -0.54
Pfn1P62962 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Pfn1P62962 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.66□□□□□ -0.54
Pfn1P62962 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.66□□□□□ -0.54
Pfn1P62962 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pfn1P62962 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.66□□□□□ -0.54
Pfn1P62962 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.66□□□□□ -0.54
Pfn1P62962 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
Pfn1P62962 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pfn1P62962 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pfn1P62962 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pfn1P62962 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.65□□□□□ -0.54
Pfn1P62962 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.65□□□□□ -0.54
Pfn1P62962 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.65□□□□□ -0.54
Pfn1P62962 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pfn1P62962 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms