Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.54□□□□□ -0.4
Lsm5P62322 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Lsm5P62322 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lsm5P62322 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lsm5P62322 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.54□□□□□ -0.4
Lsm5P62322 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lsm5P62322 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Lsm5P62322 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lsm5P62322 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Lsm5P62322 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.53□□□□□ -0.4
Lsm5P62322 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.53□□□□□ -0.4
Lsm5P62322 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lsm5P62322 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lsm5P62322 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.53□□□□□ -0.4
Lsm5P62322 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lsm5P62322 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Lsm5P62322 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lsm5P62322 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.53□□□□□ -0.4
Lsm5P62322 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Lsm5P62322 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lsm5P62322 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Lsm5P62322 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm5P62322 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm5P62322 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Lsm5P62322 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm5P62322 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm5P62322 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.52□□□□□ -0.4
Lsm5P62322 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Lsm5P62322 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lsm5P62322 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Lsm5P62322 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Lsm5P62322 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.52□□□□□ -0.41
Lsm5P62322 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.52□□□□□ -0.41
Lsm5P62322 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lsm5P62322 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Lsm5P62322 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lsm5P62322 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lsm5P62322 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lsm5P62322 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms