Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lmo4P61969 Gm5479-201ENSMUST00000160578 435 ntBASIC12.1□□□□□ -0.47
Lmo4P61969 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.1□□□□□ -0.47
Lmo4P61969 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.1□□□□□ -0.47
Lmo4P61969 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.1□□□□□ -0.47
Lmo4P61969 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lmo4P61969 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lmo4P61969 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.09□□□□□ -0.47
Lmo4P61969 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lmo4P61969 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lmo4P61969 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.09□□□□□ -0.47
Lmo4P61969 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Lmo4P61969 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lmo4P61969 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Lmo4P61969 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.09□□□□□ -0.47
Lmo4P61969 Gm13453-201ENSMUST00000118708 357 ntBASIC12.09□□□□□ -0.47
Lmo4P61969 Gm25144-201ENSMUST00000179561 110 ntBASIC12.09□□□□□ -0.47
Lmo4P61969 Gm25352-201ENSMUST00000179815 110 ntBASIC12.09□□□□□ -0.47
Lmo4P61969 Gm6888-201ENSMUST00000221983 706 ntBASIC12.09□□□□□ -0.47
Lmo4P61969 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Lmo4P61969 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lmo4P61969 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lmo4P61969 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.08□□□□□ -0.47
Lmo4P61969 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.08□□□□□ -0.47
Lmo4P61969 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Lmo4P61969 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.08□□□□□ -0.48
Lmo4P61969 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.08□□□□□ -0.48
Lmo4P61969 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.08□□□□□ -0.48
Lmo4P61969 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lmo4P61969 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.08□□□□□ -0.48
Lmo4P61969 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.08□□□□□ -0.48
Lmo4P61969 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.08□□□□□ -0.48
Lmo4P61969 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Lmo4P61969 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.08□□□□□ -0.48
Lmo4P61969 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lmo4P61969 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.07□□□□□ -0.48
Lmo4P61969 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.07□□□□□ -0.48
Lmo4P61969 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lmo4P61969 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lmo4P61969 Gm12151-201ENSMUST00000121374 290 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms