Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nup43P59235 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.18□□□□□ -0.14
Nup43P59235 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.18□□□□□ -0.14
Nup43P59235 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup43P59235 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.18□□□□□ -0.14
Nup43P59235 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup43P59235 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup43P59235 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nup43P59235 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nup43P59235 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nup43P59235 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nup43P59235 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Nup43P59235 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nup43P59235 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nup43P59235 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.17□□□□□ -0.14
Nup43P59235 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Nup43P59235 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nup43P59235 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nup43P59235 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nup43P59235 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.17□□□□□ -0.14
Nup43P59235 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Nup43P59235 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nup43P59235 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nup43P59235 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Nup43P59235 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nup43P59235 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.17□□□□□ -0.14
Nup43P59235 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup43P59235 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nup43P59235 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.16□□□□□ -0.14
Nup43P59235 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Nup43P59235 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Nup43P59235 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.16□□□□□ -0.14
Nup43P59235 Mir8117-201ENSMUST00000184773 107 ntBASIC14.16□□□□□ -0.14
Nup43P59235 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.16□□□□□ -0.14
Nup43P59235 Gm8000-201ENSMUST00000188378 592 ntBASIC14.16□□□□□ -0.14
Nup43P59235 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.16□□□□□ -0.14
Nup43P59235 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.16□□□□□ -0.14
Nup43P59235 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.16□□□□□ -0.14
Nup43P59235 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.16□□□□□ -0.14
Nup43P59235 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Nup43P59235 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup43P59235 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Nup43P59235 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup43P59235 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms