Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gm10060-201ENSMUST00000212002 111 ntBASIC15.34■□□□□ 0.05
Tubgcp3P58854 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tubgcp3P58854 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tubgcp3P58854 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tubgcp3P58854 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.34■□□□□ 0.05
Tubgcp3P58854 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tubgcp3P58854 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Tubgcp3P58854 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tubgcp3P58854 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tubgcp3P58854 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tubgcp3P58854 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tubgcp3P58854 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tubgcp3P58854 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tubgcp3P58854 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Tubgcp3P58854 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tubgcp3P58854 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Tubgcp3P58854 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tubgcp3P58854 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Tubgcp3P58854 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Tubgcp3P58854 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.33■□□□□ 0.05
Tubgcp3P58854 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Tubgcp3P58854 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Gm11764-201ENSMUST00000120221 623 ntBASIC15.33■□□□□ 0.04
Tubgcp3P58854 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.33■□□□□ 0.04
Tubgcp3P58854 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.33■□□□□ 0.04
Tubgcp3P58854 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.33■□□□□ 0.04
Tubgcp3P58854 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tubgcp3P58854 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.32■□□□□ 0.04
Tubgcp3P58854 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tubgcp3P58854 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.32■□□□□ 0.04
Tubgcp3P58854 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.32■□□□□ 0.04
Tubgcp3P58854 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.32■□□□□ 0.04
Tubgcp3P58854 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tubgcp3P58854 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tubgcp3P58854 Gm45167-201ENSMUST00000208007 322 ntBASIC15.31■□□□□ 0.04
Tubgcp3P58854 Gm7787-201ENSMUST00000216858 688 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms