Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.21■□□□□ 0.03
Ddx6P54823 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.21■□□□□ 0.03
Ddx6P54823 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.21■□□□□ 0.03
Ddx6P54823 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Ddx6P54823 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ddx6P54823 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Gm17837-201ENSMUST00000186435 985 ntBASIC15.21■□□□□ 0.03
Ddx6P54823 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Gm18766-201ENSMUST00000189811 808 ntBASIC15.21■□□□□ 0.03
Ddx6P54823 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ddx6P54823 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.21■□□□□ 0.03
Ddx6P54823 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ddx6P54823 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Ddx6P54823 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ddx6P54823 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ddx6P54823 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Ddx6P54823 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx6P54823 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx6P54823 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Ddx6P54823 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ddx6P54823 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx6P54823 Gm5479-201ENSMUST00000160578 435 ntBASIC15.2■□□□□ 0.02
Ddx6P54823 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx6P54823 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.2■□□□□ 0.02
Ddx6P54823 Gm28630-201ENSMUST00000187806 498 ntBASIC15.2■□□□□ 0.02
Ddx6P54823 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.2■□□□□ 0.02
Ddx6P54823 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.2■□□□□ 0.02
Ddx6P54823 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx6P54823 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ddx6P54823 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ddx6P54823 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ddx6P54823 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.19■□□□□ 0.02
Ddx6P54823 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.19■□□□□ 0.02
Ddx6P54823 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ddx6P54823 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ddx6P54823 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Mir8102-201ENSMUST00000184148 139 ntBASIC15.19■□□□□ 0.02
Ddx6P54823 Mir6977-201ENSMUST00000184960 64 ntBASIC15.19■□□□□ 0.02
Ddx6P54823 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.19■□□□□ 0.02
Ddx6P54823 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx6P54823 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms