Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brca1P48754 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brca1P48754 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC16.62■□□□□ 0.25
Brca1P48754 Mir1247-201ENSMUST00000116706 82 ntBASIC16.62■□□□□ 0.25
Brca1P48754 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.62■□□□□ 0.25
Brca1P48754 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.62■□□□□ 0.25
Brca1P48754 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brca1P48754 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Brca1P48754 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.62■□□□□ 0.25
Brca1P48754 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brca1P48754 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Brca1P48754 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brca1P48754 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Brca1P48754 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.61■□□□□ 0.25
Brca1P48754 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.61■□□□□ 0.25
Brca1P48754 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.61■□□□□ 0.25
Brca1P48754 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.61■□□□□ 0.25
Brca1P48754 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.61■□□□□ 0.25
Brca1P48754 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Gm12742-201ENSMUST00000117326 410 ntBASIC16.61■□□□□ 0.25
Brca1P48754 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.61■□□□□ 0.25
Brca1P48754 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.61■□□□□ 0.25
Brca1P48754 Gm17420-201ENSMUST00000164753 153 ntBASIC16.61■□□□□ 0.25
Brca1P48754 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.61■□□□□ 0.25
Brca1P48754 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Brca1P48754 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Brca1P48754 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Brca1P48754 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.6■□□□□ 0.25
Brca1P48754 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Brca1P48754 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Brca1P48754 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Brca1P48754 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Brca1P48754 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Brca1P48754 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Brca1P48754 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Brca1P48754 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.6■□□□□ 0.25
Brca1P48754 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.6■□□□□ 0.25
Brca1P48754 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.6■□□□□ 0.25
Brca1P48754 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Brca1P48754 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Brca1P48754 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.6■□□□□ 0.25
Brca1P48754 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Brca1P48754 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Brca1P48754 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Brca1P48754 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Brca1P48754 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Brca1P48754 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Brca1P48754 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Brca1P48754 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brca1P48754 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Brca1P48754 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brca1P48754 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brca1P48754 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brca1P48754 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Brca1P48754 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Brca1P48754 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.59■□□□□ 0.25
Brca1P48754 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Brca1P48754 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Brca1P48754 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Brca1P48754 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brca1P48754 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Brca1P48754 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Brca1P48754 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brca1P48754 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brca1P48754 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brca1P48754 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Brca1P48754 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Brca1P48754 Gm12341-201ENSMUST00000119724 503 ntBASIC16.59■□□□□ 0.25
Brca1P48754 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.59■□□□□ 0.25
Brca1P48754 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.59■□□□□ 0.25
Brca1P48754 Gm33320-201ENSMUST00000192232 530 ntBASIC16.59■□□□□ 0.25
Brca1P48754 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.59■□□□□ 0.25
Brca1P48754 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.59■□□□□ 0.25
Brca1P48754 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.59■□□□□ 0.25
Brca1P48754 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Brca1P48754 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.59■□□□□ 0.25
Brca1P48754 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Brca1P48754 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Brca1P48754 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Brca1P48754 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms