Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
Chd1P40201 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC22.28■■□□□ 1.16
Chd1P40201 Gm4857-201ENSMUST00000192718 785 ntBASIC22.28■■□□□ 1.16
Chd1P40201 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC22.28■■□□□ 1.16
Chd1P40201 Gm40466-201ENSMUST00000212174 422 ntBASIC22.28■■□□□ 1.16
Chd1P40201 Gm45930-201ENSMUST00000221330 292 ntBASIC22.28■■□□□ 1.16
Chd1P40201 Gm24526-201ENSMUST00000082921 158 ntBASIC22.28■■□□□ 1.16
Chd1P40201 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Chd1P40201 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Chd1P40201 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Chd1P40201 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1P40201 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1P40201 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1P40201 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1P40201 AC153526.5-201ENSMUST00000218661 2147 ntBASIC22.27■■□□□ 1.16
Chd1P40201 Gm5049-201ENSMUST00000195878 1590 ntBASIC22.27■■□□□ 1.16
Chd1P40201 Gm27847-201ENSMUST00000183711 107 ntBASIC22.27■■□□□ 1.16
Chd1P40201 Gm27375-201ENSMUST00000183799 107 ntBASIC22.27■■□□□ 1.16
Chd1P40201 Gm29199-201ENSMUST00000187766 775 ntBASIC22.27■■□□□ 1.16
Chd1P40201 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC22.27■■□□□ 1.16
Chd1P40201 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1P40201 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.27■■□□□ 1.16
Chd1P40201 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1P40201 Gm42473-201ENSMUST00000201056 2291 ntBASIC22.27■■□□□ 1.16
Chd1P40201 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1P40201 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1P40201 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1P40201 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1P40201 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Chd1P40201 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1P40201 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1P40201 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC22.26■■□□□ 1.15
Chd1P40201 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC22.26■■□□□ 1.15
Chd1P40201 Gm38002-201ENSMUST00000193255 180 ntBASIC22.26■■□□□ 1.15
Chd1P40201 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC22.26■■□□□ 1.15
Chd1P40201 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC22.26■■□□□ 1.15
Chd1P40201 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1P40201 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC22.26■■□□□ 1.15
Chd1P40201 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Chd1P40201 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1P40201 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1P40201 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1P40201 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1P40201 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC22.26■■□□□ 1.15
Chd1P40201 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1P40201 Gm43072-201ENSMUST00000200283 1671 ntBASIC22.26■■□□□ 1.15
Chd1P40201 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1P40201 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1P40201 Trav13-3-201ENSMUST00000117226 336 ntBASIC22.26■■□□□ 1.15
Chd1P40201 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC22.26■■□□□ 1.15
Chd1P40201 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Chd1P40201 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1P40201 Gm5276-201ENSMUST00000196683 1047 ntBASIC22.26■■□□□ 1.15
Chd1P40201 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC22.26■■□□□ 1.15
Chd1P40201 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd1P40201 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC22.25■■□□□ 1.15
Chd1P40201 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC22.25■■□□□ 1.15
Chd1P40201 Gm8749-201ENSMUST00000117737 331 ntBASIC22.25■■□□□ 1.15
Chd1P40201 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC22.25■■□□□ 1.15
Chd1P40201 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC22.25■■□□□ 1.15
Chd1P40201 Gm37466-201ENSMUST00000195692 652 ntBASIC22.25■■□□□ 1.15
Chd1P40201 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Chd1P40201 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC22.25■■□□□ 1.15
Chd1P40201 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chd1P40201 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1P40201 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1P40201 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1P40201 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
Chd1P40201 Gm12176-201ENSMUST00000121420 875 ntBASIC22.24■■□□□ 1.15
Chd1P40201 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC22.24■■□□□ 1.15
Chd1P40201 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC22.24■■□□□ 1.15
Chd1P40201 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1P40201 Gm26596-201ENSMUST00000180464 2655 ntBASIC22.24■■□□□ 1.15
Chd1P40201 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1P40201 Gm21470-201ENSMUST00000187680 696 ntBASIC22.24■■□□□ 1.15
Chd1P40201 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1P40201 Gm43822-201ENSMUST00000200285 476 ntBASIC22.24■■□□□ 1.15
Chd1P40201 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1P40201 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1P40201 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1P40201 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC22.24■■□□□ 1.15
Chd1P40201 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1P40201 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd1P40201 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chd1P40201 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms